Index

_

__init__() (resp_protein_toolkit.ByteNetPairedSeqs method) (resp_protein_toolkit.ByteNetSingleSeq method) (resp_protein_toolkit.InSilicoDirectedEvolution method) (resp_protein_toolkit.IntegerProteinEncoder method) (resp_protein_toolkit.OneHotProteinEncoder method) (resp_protein_toolkit.SubstitutionMatrixEncoder method) (resp_protein_toolkit.VanillaRFFLayer method)

B

ByteNetPairedSeqs (class in resp_protein_toolkit)

ByteNetSingleSeq (class in resp_protein_toolkit)

E

encode() (resp_protein_toolkit.IntegerProteinEncoder method) (resp_protein_toolkit.OneHotProteinEncoder method) (resp_protein_toolkit.SubstitutionMatrixEncoder method)

F

forward() (resp_protein_toolkit.ByteNetPairedSeqs method) (resp_protein_toolkit.ByteNetSingleSeq method) (resp_protein_toolkit.VanillaRFFLayer method)

G

get_acceptance_rate() (resp_protein_toolkit.InSilicoDirectedEvolution method) get_accepted_seqs() (resp_protein_toolkit.InSilicoDirectedEvolution method) get_ordinal_score() (resp_protein_toolkit.ByteNetPairedSeqs method) (resp_protein_toolkit.ByteNetSingleSeq method)

get_scores() (resp_protein_toolkit.InSilicoDirectedEvolution method) get_uncertainty() (resp_protein_toolkit.InSilicoDirectedEvolution method)

I

InSilicoDirectedEvolution (class in resp_protein_toolkit)

IntegerProteinEncoder (class in resp_protein_toolkit)

O

OneHotProteinEncoder (class in resp_protein_toolkit)

P

polish() (resp_protein_toolkit.InSilicoDirectedEvolution method)

predict() (resp_protein_toolkit.ByteNetPairedSeqs method) (resp_protein_toolkit.ByteNetSingleSeq method)

R

run_chain() (resp_protein_toolkit.InSilicoDirectedEvolution method)

S

SubstitutionMatrixEncoder (class in resp_protein_toolkit)

V

VanillaRFFLayer (class in resp_protein_toolkit)