resp_protein_toolkit

Tools for protein sequence preparation, uncertainty aware model training and in silico directed evolution with a trained uncertainty-aware model.

• Tools for encoding / prepping protein sequences
• Useful uncertainty-aware AI / ML models for protein sequence data
• Tools for *in silico* directed evolution
• RESP pipeline classification example

Uncertainty-aware deep learning

Use the VanillaRFF layer class to add an approximate Gaussian process as the last layer of any deep learning model and thereby obtain uncertainty quantitation / improved uncertainty calibration.

• VanillaRFF layer

Miscellaneous

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